HL_5NDJ_229
3D structure
- PDB id
- 5NDJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GGGGAAACUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5NDJ|1|1G|G|796
5NDJ|1|1G|G|797
5NDJ|1|1G|G|798
5NDJ|1|1G|G|799
5NDJ|1|1G|A|800
5NDJ|1|1G|A|801
5NDJ|1|1G|A|802
5NDJ|1|1G|C|803
5NDJ|1|1G|U|804
5NDJ|1|1G|C|805
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain BA
- 30S ribosomal protein S20
Coloring options: