HL_5NG8_029

3D structure

PDB id

5NG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

GUUGGCUUAGAAGCAGCCAUC

Length

21 nucleotides

Bulged bases

5NG8|1|AA|A|1114, 5NG8|1|AA|G|1115, 5NG8|1|AA|C|1116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NG8|1|AA|G|1103
5NG8|1|AA|U|1104
5NG8|1|AA|U|1105
5NG8|1|AA|G|1106
5NG8|1|AA|G|1107
5NG8|1|AA|C|1108
5NG8|1|AA|U|1109
5NG8|1|AA|U|1110
5NG8|1|AA|A|1111
5NG8|1|AA|G|1112
5NG8|1|AA|A|1113
5NG8|1|AA|A|1114
5NG8|1|AA|G|1115
5NG8|1|AA|C|1116
5NG8|1|AA|A|1117
5NG8|1|AA|G|1118
5NG8|1|AA|C|1119
5NG8|1|AA|C|1120
5NG8|1|AA|A|1121
5NG8|1|AA|U|1122
5NG8|1|AA|C|1123

Current chains

Chain AA

23S ribosomal RNA

Nearby chains