HL_5NG8_073

3D structure

PDB id

5NG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

AACCGCAUGGUU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NG8|1|Aa|A|190
5NG8|1|Aa|A|191
5NG8|1|Aa|C|192
5NG8|1|Aa|C|193
5NG8|1|Aa|G|194
5NG8|1|Aa|C|195
5NG8|1|Aa|A|196
5NG8|1|Aa|U|197
5NG8|1|Aa|G|198
5NG8|1|Aa|G|199
5NG8|1|Aa|U|200
5NG8|1|Aa|U|201

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Aq

30S ribosomal protein S17