3D structure

PDB id
5NG8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
Experimental method
ELECTRON MICROSCOPY
Resolution
6.76 Å

Loop

Sequence
GGUCUUGC
Length
8 nucleotides
Bulged bases
5NG8|1|Ba|U|220
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5NG8|1|Ba|G|216
5NG8|1|Ba|G|217
5NG8|1|Ba|U|218
5NG8|1|Ba|C|219
5NG8|1|Ba|U|220
5NG8|1|Ba|U|221
5NG8|1|Ba|G|222
5NG8|1|Ba|C|223

Current chains

Chain Ba
16S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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