HL_5NG8_220

3D structure

PDB id

5NG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

UAACCUUUUAGGAG

Length

14 nucleotides

Bulged bases

5NG8|1|Ba|U|1463

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NG8|1|Ba|U|1455
5NG8|1|Ba|A|1456
5NG8|1|Ba|A|1457
5NG8|1|Ba|C|1458
5NG8|1|Ba|C|1459
5NG8|1|Ba|U|1460
5NG8|1|Ba|U|1461
5NG8|1|Ba|U|1462
5NG8|1|Ba|U|1463
5NG8|1|Ba|A|1464
5NG8|1|Ba|G|1465
5NG8|1|Ba|G|1466
5NG8|1|Ba|A|1467
5NG8|1|Ba|G|1468

Current chains

Chain Ba

16S ribosomal RNA

Nearby chains

Chain Bt

30S ribosomal protein S20