HL_5NWY_060

3D structure

PDB id

5NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCA

Length

3 nucleotides

Bulged bases

5NWY|1|N|C|885

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5NWY_060 not in the Motif Atlas

Homologous match to HL_5J7L_158

Geometric discrepancy: 0.4833

The information below is about HL_5J7L_158

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NWY|1|N|U|884
5NWY|1|N|C|885
5NWY|1|N|A|892

Current chains

Chain N

23S rRNA

Nearby chains

Chain C

30S ribosomal protein S13