HL_5NWY_063

3D structure

PDB id

5NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCUUAGAAGCAGC

Length

13 nucleotides

Bulged bases

5NWY|1|N|U|1066, 5NWY|1|N|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NWY|1|N|G|1063
5NWY|1|N|C|1064
5NWY|1|N|U|1065
5NWY|1|N|U|1066
5NWY|1|N|A|1067
5NWY|1|N|G|1068
5NWY|1|N|A|1069
5NWY|1|N|A|1070
5NWY|1|N|G|1071
5NWY|1|N|C|1072
5NWY|1|N|A|1073
5NWY|1|N|G|1074
5NWY|1|N|C|1075

Current chains

Chain N

23S rRNA

Nearby chains

Chain V

50S ribosomal protein L11