HL_5NWY_102

3D structure

PDB id

5NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

5NWY|1|N|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5NWY_102 not in the Motif Atlas

Geometric match to HL_4V88_192

Geometric discrepancy: 0.1082

The information below is about HL_4V88_192

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

5NWY|1|N|U|2796
5NWY|1|N|U|2797
5NWY|1|N|U|2798
5NWY|1|N|A|2799

Current chains

Chain N

23S rRNA

Nearby chains