HL_5O5J_026

3D structure

PDB id

5O5J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S small ribosomal subunit from Mycobacterium smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

CGUUAUGG

Length

8 nucleotides

Bulged bases

5O5J|1|A|G|1120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5O5J_026 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.5406

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5O5J|1|A|C|1114
5O5J|1|A|G|1115
5O5J|1|A|U|1116
5O5J|1|A|U|1117
5O5J|1|A|A|1118
5O5J|1|A|U|1119
5O5J|1|A|G|1120
5O5J|1|A|G|1121

Current chains

Chain A

16S rRNA

Nearby chains