3D structure

PDB id
5O7H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Cascade-I-Fv complex from Shewanella putrefaciens
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CGCACAG
Length
7 nucleotides
Bulged bases
5O7H|1|A|C|36
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
GNRA with one bulged base
Broad Annotation
GNRA
Motif group
HL_85603.1
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
304

Unit IDs

5O7H|1|A|C|32
5O7H|1|A|G|33
5O7H|1|A|C|34
5O7H|1|A|A|35
5O7H|1|A|C|36
5O7H|1|A|A|37
5O7H|1|A|G|38

Current chains

Chain A
crRNA

Nearby chains

Chain B
CRISPR-associated protein, Csy4 family

Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.0461 s