HL_5OA3_032

3D structure

PDB id

5OA3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 40S-eIF2D-re-initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GAUUGCAAUUAUUC

Length

14 nucleotides

Bulged bases

5OA3|1|2|U|1621, 5OA3|1|2|U|1622, 5OA3|1|2|A|1623

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OA3|1|2|G|1613
5OA3|1|2|A|1614
5OA3|1|2|U|1615
5OA3|1|2|U|1616
5OA3|1|2|G|1617
5OA3|1|2|C|1618
5OA3|1|2|A|1619
5OA3|1|2|A|1620
5OA3|1|2|U|1621
5OA3|1|2|U|1622
5OA3|1|2|A|1623
5OA3|1|2|U|1624
5OA3|1|2|U|1625
5OA3|1|2|C|1626

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain P

40S ribosomal protein S15

Chain S

40S ribosomal protein S18

Chain T

40S ribosomal protein S19

Chain d

40S ribosomal protein S29