HL_5OMW_004
3D structure
- PDB id
- 5OMW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mutant T252A of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformation
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GUUCAAGUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5OMW_004 not in the Motif Atlas
- Homologous match to HL_2BTE_004
- Geometric discrepancy: 0.0737
- The information below is about HL_2BTE_004
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
5OMW|1|B|G|53
5OMW|1|B|U|54
5OMW|1|B|U|55
5OMW|1|B|C|56
5OMW|1|B|A|57
5OMW|1|B|A|58
5OMW|1|B|G|59
5OMW|1|B|U|60
5OMW|1|B|C|61
Current chains
- Chain B
- L-leucyl-tRNA
Nearby chains
- Chain A
- Leucine--tRNA ligase
Coloring options: