HL_5ON2_002

3D structure

PDB id

5ON2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformation

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UUUAAAA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ON2_002 not in the Motif Atlas

Geometric match to HL_5FQ5_003

Geometric discrepancy: 0.3109

The information below is about HL_5FQ5_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

5ON2|1|B|U|32
5ON2|1|B|U|33
5ON2|1|B|U|34
5ON2|1|B|A|35
5ON2|1|B|A|36
5ON2|1|B|A|37
5ON2|1|B|A|38

Current chains

Chain B

tRNA(leu)

Nearby chains

Chain A

Leucine--tRNA ligase

Chain D

Leucine--tRNA ligase

Chain E

Transfer RNA; tRNA