HL_5ON6_023
3D structure
- PDB id
- 5ON6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of haemanthamine bound to the 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAAUG
- Length
- 7 nucleotides
- Bulged bases
- 5ON6|1|1|U|1028
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ON6_023 not in the Motif Atlas
- Homologous match to HL_5TBW_023
- Geometric discrepancy: 0.0985
- The information below is about HL_5TBW_023
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
5ON6|1|1|C|1023
5ON6|1|1|G|1024
5ON6|1|1|A|1025
5ON6|1|1|A|1026
5ON6|1|1|A|1027
5ON6|1|1|U|1028
5ON6|1|1|G|1029
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain Q
- 40S ribosomal protein S15
- Chain i
- Suppressor protein STM1
- Chain s
- 60S ribosomal protein L11-B
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