HL_5ON6_129

3D structure

PDB id

5ON6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of haemanthamine bound to the 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCUAACCUUGAGUCCUUGUGGCUCUUGGCGAAC

Length

33 nucleotides

Bulged bases

5ON6|1|A|U|718, 5ON6|1|A|U|719, 5ON6|1|A|U|721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ON6|1|A|G|703
5ON6|1|A|C|704
5ON6|1|A|U|705
5ON6|1|A|A|706
5ON6|1|A|A|707
5ON6|1|A|C|708
5ON6|1|A|C|709
5ON6|1|A|U|710
5ON6|1|A|U|711
5ON6|1|A|G|712
5ON6|1|A|A|713
5ON6|1|A|G|714
5ON6|1|A|U|715
5ON6|1|A|C|716
5ON6|1|A|C|717
5ON6|1|A|U|718
5ON6|1|A|U|719
5ON6|1|A|G|720
5ON6|1|A|U|721
5ON6|1|A|G|722
5ON6|1|A|G|723
5ON6|1|A|C|724
5ON6|1|A|U|725
5ON6|1|A|C|726
5ON6|1|A|U|727
5ON6|1|A|U|728
5ON6|1|A|G|729
5ON6|1|A|G|730
5ON6|1|A|C|731
5ON6|1|A|G|732
5ON6|1|A|A|733
5ON6|1|A|A|734
5ON6|1|A|C|735

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain F

40S ribosomal protein S4-A