HL_5ON6_147
3D structure
- PDB id
- 5ON6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of haemanthamine bound to the 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUCAUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 5ON6|1|A|G|1601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ON6_147 not in the Motif Atlas
- Geometric match to HL_4V88_220
- Geometric discrepancy: 0.1093
- The information below is about HL_4V88_220
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5ON6|1|A|G|1594
5ON6|1|A|U|1595
5ON6|1|A|C|1596
5ON6|1|A|A|1597
5ON6|1|A|U|1598
5ON6|1|A|C|1599
5ON6|1|A|A|1600
5ON6|1|A|G|1601
5ON6|1|A|C|1602
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain R
- 40S ribosomal protein S16-A
- Chain T
- 40S ribosomal protein S18-A
- Chain U
- 40S ribosomal protein S19-A
- Chain V
- 40S ribosomal protein S20
- Chain e
- 40S ribosomal protein S29-A
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