HL_5OOL_022

3D structure

PDB id

5OOL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

AGCAUCACCAGUAUU

Length

15 nucleotides

Bulged bases

5OOL|1|A|U|2522, 5OOL|1|A|C|2523, 5OOL|1|A|A|2527, 5OOL|1|A|U|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OOL|1|A|A|2518
5OOL|1|A|G|2519
5OOL|1|A|C|2520
5OOL|1|A|A|2521
5OOL|1|A|U|2522
5OOL|1|A|C|2523
5OOL|1|A|A|2524
5OOL|1|A|C|2525
5OOL|1|A|C|2526
5OOL|1|A|A|2527
5OOL|1|A|G|2528
5OOL|1|A|U|2529
5OOL|1|A|A|2530
5OOL|1|A|U|2531
5OOL|1|A|U|2532

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial