HL_5OOL_033

3D structure

PDB id

5OOL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

UUGUUCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5OOL_033 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.2144

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

5OOL|1|A|U|3038
5OOL|1|A|U|3039
5OOL|1|A|G|3040
5OOL|1|A|U|3041
5OOL|1|A|U|3042
5OOL|1|A|C|3043
5OOL|1|A|A|3044

Current chains

Chain A

16S ribosomal RNA

Nearby chains