HL_5OPT_008

3D structure

PDB id

5OPT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of KSRP in context of Trypanosoma cruzi 40S

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GUUUUUUUAU

Length

10 nucleotides

Bulged bases

5OPT|1|E|A|330

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OPT|1|E|G|322
5OPT|1|E|U|323
5OPT|1|E|U|324
5OPT|1|E|U|325
5OPT|1|E|U|326
5OPT|1|E|U|327
5OPT|1|E|U|328
5OPT|1|E|U|329
5OPT|1|E|A|330
5OPT|1|E|U|331

Current chains

Chain E

18S rRNA

Nearby chains

Chain P

40S ribosomal protein S6