HL_5OSG_001

3D structure

PDB id

5OSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of KSRP in context of Leishmania donovani 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAG

Length

3 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5OSG_001 not in the Motif Atlas

Geometric match to HL_8Y03_001

Geometric discrepancy: 0.3804

The information below is about HL_8Y03_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

5OSG|1|2|C|199
5OSG|1|2|A|200
5OSG|1|2|G|226

Current chains

Chain 2

18S rRNA

Nearby chains

Chain h

RNA binding protein, putative