3D structure

PDB id
5T16 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of yeast RNase III (Rnt1p) complexed with a non-hydrolyzable RNA substrate analog
Experimental method
X-RAY DIFFRACTION
Resolution
2.78 Å

Loop

Sequence
GAGUCC
Length
6 nucleotides
Bulged bases (A, C, G, U)
17A, 18G, 20C
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_28980.2
Basepair signature
cWW-F
Number of instances in this motif group
11

Unit IDs

5T16|1|H|G|16
5T16|1|H|A|17
5T16|1|H|G|18
5T16|1|H|U|19
5T16|1|H|C|20
5T16|1|H|C|21

Current chains

Chain H
RNA substrate analog

Nearby chains

Chain A
Ribonuclease 3
Chain B
Ribonuclease 3
Chain E
Ribonuclease 3
Chain F
Ribonuclease 3

Coloring options:

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