HL_5T5A_001
3D structure
- PDB id
- 5T5A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the Twister Sister (TS) Ribozyme at 2.0 Angstrom
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2 Å
Loop
- Sequence
- GUGCAAGCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
5T5A|1|A|G|21
5T5A|1|A|U|22
5T5A|1|A|G|23
5T5A|1|A|C|24
5T5A|1|A|A|25
5T5A|1|A|A|26
5T5A|1|A|G|27
5T5A|1|A|C|28
5T5A|1|A|C|29
Current chains
- Chain A
- DNA/RNA (71-MER)
Nearby chains
No other chains within 10ÅColoring options: