HL_5T7V_007

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

5T7V|1|A|A|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_007 not in the Motif Atlas

Homologous match to HL_6CZR_080

Geometric discrepancy: 0.519

The information below is about HL_6CZR_080

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

58

Unit IDs

5T7V|1|A|C|350
5T7V|1|A|U|351
5T7V|1|A|A|352
5T7V|1|A|C|353
5T7V|1|A|G|354
5T7V|1|A|G|355

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain L1

50S ribosomal protein L19

Chain LN

50S ribosomal protein L14