HL_5T7V_042

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_042 not in the Motif Atlas

Homologous match to HL_4WF9_015

Geometric discrepancy: 0.1504

The information below is about HL_4WF9_015

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

5T7V|1|B|C|508
5T7V|1|B|G|509
5T7V|1|B|U|510
5T7V|1|B|G|511
5T7V|1|B|A|512
5T7V|1|B|G|513

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain LG

50S ribosomal protein L34

Chain LJ

50S ribosomal protein L4