HL_5T7V_046

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGUAAAU

Length

7 nucleotides

Bulged bases

5T7V|1|B|A|658, 5T7V|1|B|A|660

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_046 not in the Motif Atlas

Geometric match to HL_2ZNI_001

Geometric discrepancy: 0.2985

The information below is about HL_2ZNI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

5T7V|1|B|A|655
5T7V|1|B|G|656
5T7V|1|B|U|657
5T7V|1|B|A|658
5T7V|1|B|A|659
5T7V|1|B|A|660
5T7V|1|B|U|661

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain LJ

50S ribosomal protein L4