HL_5T7V_054

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAACAGC

Length

8 nucleotides

Bulged bases

5T7V|1|B|A|1024

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_054 not in the Motif Atlas

Homologous match to HL_5J7L_160

Geometric discrepancy: 0.183

The information below is about HL_5J7L_160

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

5T7V|1|B|G|1022
5T7V|1|B|A|1023
5T7V|1|B|A|1024
5T7V|1|B|A|1025
5T7V|1|B|C|1026
5T7V|1|B|A|1027
5T7V|1|B|G|1028
5T7V|1|B|C|1029

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain L3

50S ribosomal protein L20

Chain L4

50S ribosomal protein L21

Chain LD

50S ribosomal protein L30