HL_5T7V_107

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCAACAAGCUUGCUUGUUGG

Length

20 nucleotides

Bulged bases

5T7V|1|B|C|284, 5T7V|1|B|C|288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_107 not in the Motif Atlas

Homologous match to HL_7A0S_071

Geometric discrepancy: 0.5258

The information below is about HL_7A0S_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T7V|1|B|C|276
5T7V|1|B|C|277
5T7V|1|B|A|278
5T7V|1|B|A|279
5T7V|1|B|C|280
5T7V|1|B|A|281
5T7V|1|B|A|282
5T7V|1|B|G|283
5T7V|1|B|C|284
5T7V|1|B|U|285
5T7V|1|B|U|286
5T7V|1|B|G|287
5T7V|1|B|C|288
5T7V|1|B|U|289
5T7V|1|B|U|290
5T7V|1|B|G|291
5T7V|1|B|U|292
5T7V|1|B|U|293
5T7V|1|B|G|294
5T7V|1|B|G|295

Current chains

Chain B

23S ribosomal RNA

Nearby chains