HL_5T7V_120
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- 5T7V|1|A|C|336
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5T7V_120 not in the Motif Atlas
- Homologous match to HL_4LFB_008
- Geometric discrepancy: 0.5242
- The information below is about HL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39665.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5T7V|1|A|A|328
5T7V|1|A|A|329
5T7V|1|A|C|330
5T7V|1|A|U|331
5T7V|1|A|G|332
5T7V|1|A|A|333
5T7V|1|A|G|334
5T7V|1|A|A|335
5T7V|1|A|C|336
5T7V|1|A|A|337
5T7V|1|A|C|338
5T7V|1|A|G|339
5T7V|1|A|G|340
5T7V|1|A|U|341
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain S7
- 30S ribosomal protein S16
- Chain SA
- 30S ribosomal protein S20
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