HL_5T7V_129

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGUUAAUG

Length

8 nucleotides

Bulged bases

5T7V|1|B|U|590, 5T7V|1|B|U|593

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_129 not in the Motif Atlas

Homologous match to HL_4WF9_017

Geometric discrepancy: 0.2933

The information below is about HL_4WF9_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50318.1

Basepair signature

cWW-cSH-F-F

Number of instances in this motif group

1

Unit IDs

5T7V|1|B|C|587
5T7V|1|B|G|588
5T7V|1|B|U|589
5T7V|1|B|U|590
5T7V|1|B|A|591
5T7V|1|B|A|592
5T7V|1|B|U|593
5T7V|1|B|G|594

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain L4

50S ribosomal protein L21