HL_5T7V_132

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AAAGAUGAU

Length

9 nucleotides

Bulged bases

5T7V|1|B|A|2840

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_132 not in the Motif Atlas

Homologous match to HL_4WF9_064

Geometric discrepancy: 0.1871

The information below is about HL_4WF9_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

5T7V|1|B|A|2839
5T7V|1|B|A|2840
5T7V|1|B|A|2841
5T7V|1|B|G|2842
5T7V|1|B|A|2843
5T7V|1|B|U|2844
5T7V|1|B|G|2845
5T7V|1|B|A|2846
5T7V|1|B|U|2847

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LQ

50S ribosomal protein L17