HL_5TBW_016

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_85603.1

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

304

Unit IDs

5TBW|1|1|U|707
5TBW|1|1|G|708
5TBW|1|1|A|709
5TBW|1|1|A|710
5TBW|1|1|A|711
5TBW|1|1|G|712

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L28

Chain AJ

60S ribosomal protein L36-A

Chain t

60S ribosomal protein L13-A

Chain y

60S ribosomal protein L18-A