3D structure

PDB id
5TBW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GGAUGAAC
Length
8 nucleotides
Bulged bases (A, C, G, U)
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_64430.3
Basepair signature
cWW-F-F
Number of instances in this motif group
13

Unit IDs

5TBW|1|1|G|1148
5TBW|1|1|G|1149
5TBW|1|1|A|1150
5TBW|1|1|U|1151
5TBW|1|1|G|1152
5TBW|1|1|A|1153
5TBW|1|1|A|1154
5TBW|1|1|C|1155

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain AF
60S ribosomal protein L32
Chain AG
60S ribosomal protein L33-A
Chain o
60S ribosomal protein L7-A

Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.2771 s