HL_5TBW_037

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUUAUCUUU

Length

9 nucleotides

Bulged bases (A, C, G, U)

1687U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84085.3

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

17

Unit IDs

5TBW|1|1|G|1680
5TBW|1|1|U|1681
5TBW|1|1|U|1682
5TBW|1|1|A|1683
5TBW|1|1|U|1684
5TBW|1|1|C|1685
5TBW|1|1|U|1686
5TBW|1|1|U|1687
5TBW|1|1|U|1688

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain 5

60S ribosomal protein L22-A

Chain z

60S ribosomal protein L19-A