HL_5TBW_039

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

ACCUUU

Length

6 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Other HL

Broad Annotation

Other HL

Motif group

HL_91104.2

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

5TBW|1|1|A|1760
5TBW|1|1|C|1761
5TBW|1|1|C|1762
5TBW|1|1|U|1763
5TBW|1|1|U|1764
5TBW|1|1|U|1765

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain 8

60S ribosomal protein L25

Chain z

60S ribosomal protein L19-A