HL_5TBW_044

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGUAC

Length

5 nucleotides

Bulged bases (A, C, G, U)

1954G, 1955U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_09829.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

5TBW|1|1|G|1953
5TBW|1|1|G|1954
5TBW|1|1|U|1955
5TBW|1|1|A|2093
5TBW|1|1|C|2094

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain z

60S ribosomal protein L19-A