HL_5TBW_051

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

5TBW|1|1|A|2372, 5TBW|1|1|A|2373, 5TBW|1|1|C|2374

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.7

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

6

Unit IDs

5TBW|1|1|G|2369
5TBW|1|1|G|2370
5TBW|1|1|G|2371
5TBW|1|1|A|2372
5TBW|1|1|A|2373
5TBW|1|1|C|2374
5TBW|1|1|G|2375
5TBW|1|1|G|2376
5TBW|1|1|G|2377
5TBW|1|1|C|2378

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AF

60S ribosomal protein L32

Chain k

60S ribosomal protein L3