HL_5TBW_067
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUGAACGCCUCUAAG
- Length
- 15 nucleotides
- Bulged bases (A, C, G, U)
- 3116G, 3120C
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56677.8
- Basepair signature
- cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 8
Unit IDs
5TBW|1|1|C|3110
5TBW|1|1|U|3111
5TBW|1|1|G|3112
5TBW|1|1|A|3113
5TBW|1|1|A|3114
5TBW|1|1|C|3115
5TBW|1|1|G|3116
5TBW|1|1|C|3117
5TBW|1|1|C|3118
5TBW|1|1|U|3119
5TBW|1|1|C|3120
5TBW|1|1|U|3121
5TBW|1|1|A|3122
5TBW|1|1|A|3123
5TBW|1|1|G|3124
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AN
- Ubiquitin-60S ribosomal protein L40
- Chain q
- 60S ribosomal protein L9-A
- Chain w
- 60S ribosomal protein L16-A
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