HL_5TBW_075
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CACAUUG
- Length
- 7 nucleotides
- Bulged bases (A, C, G, U)
- 111A, 113U
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_83767.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 11
Unit IDs
5TBW|1|4|C|108
5TBW|1|4|A|109
5TBW|1|4|C|110
5TBW|1|4|A|111
5TBW|1|4|U|112
5TBW|1|4|U|113
5TBW|1|4|G|114
Current chains
- Chain 4
- 5.8S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 8
- 60S ribosomal protein L25
- Chain AK
- 60S ribosomal protein L37-A
- Chain AM
- 60S ribosomal protein L39
Coloring options: