HL_5TBW_089

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGCCCAUUCGGGUCU

Length

16 nucleotides

Bulged bases

5TBW|1|A|C|495

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TBW|1|A|G|486
5TBW|1|A|G|487
5TBW|1|A|G|488
5TBW|1|A|C|489
5TBW|1|A|C|490
5TBW|1|A|C|491
5TBW|1|A|A|492
5TBW|1|A|U|493
5TBW|1|A|U|494
5TBW|1|A|C|495
5TBW|1|A|G|496
5TBW|1|A|G|497
5TBW|1|A|G|498
5TBW|1|A|U|499
5TBW|1|A|C|500
5TBW|1|A|U|501

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain K

40S ribosomal protein S9-A