HL_5TBW_092

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCUAACCUUGAGUCCUUGUGGCUCUUGGCGAAC

Length

33 nucleotides

Bulged bases

5TBW|1|A|C|709, 5TBW|1|A|U|718, 5TBW|1|A|U|719, 5TBW|1|A|U|721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TBW|1|A|G|703
5TBW|1|A|C|704
5TBW|1|A|U|705
5TBW|1|A|A|706
5TBW|1|A|A|707
5TBW|1|A|C|708
5TBW|1|A|C|709
5TBW|1|A|U|710
5TBW|1|A|U|711
5TBW|1|A|G|712
5TBW|1|A|A|713
5TBW|1|A|G|714
5TBW|1|A|U|715
5TBW|1|A|C|716
5TBW|1|A|C|717
5TBW|1|A|U|718
5TBW|1|A|U|719
5TBW|1|A|G|720
5TBW|1|A|U|721
5TBW|1|A|G|722
5TBW|1|A|G|723
5TBW|1|A|C|724
5TBW|1|A|U|725
5TBW|1|A|C|726
5TBW|1|A|U|727
5TBW|1|A|U|728
5TBW|1|A|G|729
5TBW|1|A|G|730
5TBW|1|A|C|731
5TBW|1|A|G|732
5TBW|1|A|A|733
5TBW|1|A|A|734
5TBW|1|A|C|735

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain F

40S ribosomal protein S4-A