HL_5TBW_097
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TBW_097 not in the Motif Atlas
- Geometric match to HL_4V88_207
- Geometric discrepancy: 0.0714
- The information below is about HL_4V88_207
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
5TBW|1|A|C|937
5TBW|1|A|G|938
5TBW|1|A|A|939
5TBW|1|A|A|940
5TBW|1|A|A|941
5TBW|1|A|G|942
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain O
- 40S ribosomal protein S13
- Chain b
- 40S ribosomal protein S26-B
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