HL_5TBW_115
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TBW_115 not in the Motif Atlas
- Homologous match to HL_5TBW_003
- Geometric discrepancy: 0.0591
- The information below is about HL_5TBW_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67216.9
- Basepair signature
- cWW-cWW-F-tSH
- Number of instances in this motif group
- 9
Unit IDs
5TBW|1|AR|C|90
5TBW|1|AR|G|91
5TBW|1|AR|G|92
5TBW|1|AR|C|93
5TBW|1|AR|G|94
5TBW|1|AR|A|95
5TBW|1|AR|G|96
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain CN
- 60S ribosomal protein L13-A
- Chain CS
- 60S ribosomal protein L18-A
- Chain DC
- 60S ribosomal protein L28
- Chain DQ
- 60S ribosomal protein L42-A
Coloring options: