HL_5TBW_165

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAAUUCAUUUUC

Length

12 nucleotides

Bulged bases

5TBW|1|AR|C|2539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TBW|1|AR|G|2534
5TBW|1|AR|A|2535
5TBW|1|AR|A|2536
5TBW|1|AR|U|2537
5TBW|1|AR|U|2538
5TBW|1|AR|C|2539
5TBW|1|AR|A|2540
5TBW|1|AR|U|2541
5TBW|1|AR|U|2542
5TBW|1|AR|U|2543
5TBW|1|AR|U|2544
5TBW|1|AR|C|2545

Current chains

Chain AR

25S ribosomal RNA

Nearby chains

Chain CJ

60S ribosomal protein L8-A

Chain s1

40S ribosomal protein S1-A