3D structure

PDB id
5TBW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GGUGAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_85603.1
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
304

Unit IDs

5TBW|1|AS|G|88
5TBW|1|AS|G|89
5TBW|1|AS|U|90
5TBW|1|AS|G|91
5TBW|1|AS|A|92
5TBW|1|AS|C|93

Current chains

Chain AS
5S ribosomal RNA

Nearby chains

Chain AR
Large subunit ribosomal RNA; LSU rRNA
Chain CI
60S ribosomal protein L7-A
Chain CL
60S ribosomal protein L10
Chain CU
60S ribosomal protein L20-A

Coloring options:

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