HL_5TBW_224

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UAGAGAAGGGGGCAACUCCAUCUCAG

Length

26 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TBW|1|sR|U|1688
5TBW|1|sR|A|1689
5TBW|1|sR|G|1690
5TBW|1|sR|A|1691
5TBW|1|sR|G|1692
5TBW|1|sR|A|1693
5TBW|1|sR|A|1694
5TBW|1|sR|G|1695
5TBW|1|sR|G|1696
5TBW|1|sR|G|1697
5TBW|1|sR|G|1698
5TBW|1|sR|G|1699
5TBW|1|sR|C|1700
5TBW|1|sR|A|1701
5TBW|1|sR|A|1702
5TBW|1|sR|C|1703
5TBW|1|sR|U|1704
5TBW|1|sR|C|1705
5TBW|1|sR|C|1706
5TBW|1|sR|A|1707
5TBW|1|sR|U|1708
5TBW|1|sR|C|1709
5TBW|1|sR|U|1710
5TBW|1|sR|C|1711
5TBW|1|sR|A|1712
5TBW|1|sR|G|1713

Current chains

Chain sR

18S ribosomal RNA

Nearby chains

Chain CY

60S ribosomal protein L24-A

Chain s6

40S ribosomal protein S6-A