HL_5TGA_229

3D structure

PDB id

5TGA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGCCUCGGUA

Length

10 nucleotides

Bulged bases

5TGA|1|1|U|545, 5TGA|1|1|C|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TGA|1|1|U|541
5TGA|1|1|G|542
5TGA|1|1|C|543
5TGA|1|1|C|544
5TGA|1|1|U|545
5TGA|1|1|C|546
5TGA|1|1|G|547
5TGA|1|1|G|548
5TGA|1|1|U|549
5TGA|1|1|A|550

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain N0

60S ribosomal protein L20-A