HL_5TGA_246

3D structure

PDB id

5TGA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AGAAGGGGGCAACUCCAUCU

Length

20 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TGA|1|2|A|1804
5TGA|1|2|G|1805
5TGA|1|2|A|1806
5TGA|1|2|A|1807
5TGA|1|2|G|1808
5TGA|1|2|G|1809
5TGA|1|2|G|1810
5TGA|1|2|G|1811
5TGA|1|2|G|1812
5TGA|1|2|C|1813
5TGA|1|2|A|1814
5TGA|1|2|A|1815
5TGA|1|2|C|1816
5TGA|1|2|U|1817
5TGA|1|2|C|1818
5TGA|1|2|C|1819
5TGA|1|2|A|1820
5TGA|1|2|U|1821
5TGA|1|2|C|1822
5TGA|1|2|U|1823

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain N4

60S ribosomal protein L24-A

Chain S6

40S ribosomal protein S6-A