HL_5TGM_116
3D structure
- PDB id
- 5TGM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGAACUUAAGCAUAUCAAUAAG
- Length
- 23 nucleotides
- Bulged bases
- 5TGM|1|5|A|40, 5TGM|1|5|A|49
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TGM|1|5|C|31
5TGM|1|5|U|32
5TGM|1|5|G|33
5TGM|1|5|A|34
5TGM|1|5|A|35
5TGM|1|5|C|36
5TGM|1|5|U|37
5TGM|1|5|U|38
5TGM|1|5|A|39
5TGM|1|5|A|40
5TGM|1|5|G|41
5TGM|1|5|C|42
5TGM|1|5|A|43
5TGM|1|5|U|44
5TGM|1|5|A|45
5TGM|1|5|U|46
5TGM|1|5|C|47
5TGM|1|5|A|48
5TGM|1|5|A|49
5TGM|1|5|U|50
5TGM|1|5|A|51
5TGM|1|5|A|52
5TGM|1|5|G|53
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain m3
- 60S ribosomal protein L13-A
- Chain m5
- 60S ribosomal protein L15-A
- Chain n8
- 60S ribosomal protein L28
- Chain o7
- 60S ribosomal protein L37-A
- Chain q2
- 60S ribosomal protein L42-A
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