HL_5TGM_184
3D structure
- PDB id
- 5TGM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CCUUGUG
- Length
- 7 nucleotides
- Bulged bases
- 5TGM|1|5|U|3195, 5TGM|1|5|U|3198
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TGM_184 not in the Motif Atlas
- Geometric match to HL_5J7L_200
- Geometric discrepancy: 0.2703
- The information below is about HL_5J7L_200
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_08100.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5TGM|1|5|C|3193
5TGM|1|5|C|3194
5TGM|1|5|U|3195
5TGM|1|5|U|3196
5TGM|1|5|G|3197
5TGM|1|5|U|3198
5TGM|1|5|G|3199
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain l9
- 60S ribosomal protein L9-A
- Chain m4
- 60S ribosomal protein L14-A
- Chain m6
- 60S ribosomal protein L16-A
Coloring options: