3D structure

PDB id
5U9F (explore in PDB, NAKB, or RNA 3D Hub)
Description
3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CUUAGAAGCAG
Length
11 nucleotides
Bulged bases
5U9F|1|01|U|1065, 5U9F|1|01|U|1066, 5U9F|1|01|A|1070
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5U9F|1|01|C|1064
5U9F|1|01|U|1065
5U9F|1|01|U|1066
5U9F|1|01|A|1067
5U9F|1|01|G|1068
5U9F|1|01|A|1069
5U9F|1|01|A|1070
5U9F|1|01|G|1071
5U9F|1|01|C|1072
5U9F|1|01|A|1073
5U9F|1|01|G|1074

Current chains

Chain 01
23S ribosomal RNA

Nearby chains

Chain 11
50S ribosomal protein L11
Chain Z
Peptide chain release factor RF2

Coloring options:

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